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Contact: yaya@bernstein-plus-sons.com

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Please read the NOTICE futher down on this page carefully. The following links may be of some interest:



  1. Unsorted DC7 paper preprint, 13 July 2022


  2. RI_LaTeX_Presentation_dc7unsrt-12.pdf, talk at ACA 2022 in Portland, OR, 30 July 2022


  3. Selling Reduction paper preprint, 31 October 2018


  4. A Discussion on converting Fortran applications to mmCIF


  5. CIFtbx - a CIF toolbox (with Cyclops and cif2cif)
    See also Hall, S.R. and Bernstein, H.J., 1996. CIF applications. V. CIFtbx2: Extended tool box for manipulating CIFs. Applied Crystallography, 29(5), pp. 598 -- 603.






  6. cif2pdb - a program to convert mmCIF to pseudo-PDB format


  7. pdb2cif - a script to convert from PDB format to mmCIF
    Cite as: Authors: Philip E. Bourne, Herbert J. Bernstein, Frances C. Bernstein, github.com/yayahjb/pdb2cif.git
    1998 -- 2025. See also Bernstein, H.J., Bernstein, F.C. and Bourne, P.E., 1998. CIF applications. VIII. pdb2cif: translating PDB entries into mmCIF format. Applied Crystallography, 31(2), pp. 282 -- 295.


  8. OpenRasMol - a version of R. Sayle's RasMol which accepts core CIF and mmCIF datasets and which can display alternate conformers and multiple NMR models
    Cite as: Author: Herbert J. Bernstein, based on RasMol by Roger Sayle, 1992.
    See also Bernstein, H.J., 2000. Recent changes to RasMol, recombining the variants. Trends in biochemical sciences, 25(9), pp.453 -- 455. github.com/yayahjb/rasmol.git


  9. CBF - specifications and an ANSI-C API for CBF/imgCIF
    Cite as: Authors: Paul J., Ellis, Herbert J. Bernstein, Johan Hattne, Elena Zlateva Mosoff, Daniel W. Paley, Peter Chang, Jon Wright, John Bollinger, Nicholas Devenish, James Hester, Aaron S. Brewster, Chris Nielsen, Graeme Winter, et. al., github.com/dials/cbflib.git
    1998 -- 2025, with contributions and helpful comments by many others. Originally released on Sourceforge. See also www.iucr.org/resources/cif/software/cbflib. The dials site is the actively maintained site.


  10. Data Communications -- Fall 1983 Lecture Notes a graduate CS course taught at NYU in the 1980's, Notes by Herbert J. Bernstein and Max Goldstein


  11. Network Design and Implementation -- Spring 1984 Lecture Notes Network_Design_and_Implementation_Spring_1984, a graduate CS course taught at NYU in the 1980's, Notes by Herbert J. Bernstein and Max Goldstein


  12. Colon and Rectal Surgeons of Long Island, P.C. a site designed with the assistance of Bernstein + Sons

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