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Documentation
RasMol 2.7.2.1

RasMol
***NEW*** HPUX_11, Solaris 2.5, OpenVMS Binaries available. ***NEW***
  Version   MAC PPC
binaries
  MSWIN
binaries
RasWin
Help File
  LINUX
binaries
RasMol
Help File
  MORE ...  
2.7.1 8     32 8 raw gz 8 16 32 raw gz  
2.7.1.1 8     32 8 raw gz 8 16 32 raw gz HPUX 11   Solaris 2.5
2.7.2 8     32 8 raw gz 8 16 32 raw gz  
2.7.2.1 8     32 8 raw gz 8 16 32 raw gz HPUX 11   Solaris 2.5   OpenVMS
 
See Source Code and Binaries for more.

Molecular Graphics Visualisation Tool
14 April 2001

Based on RasMol 2.6 by Roger Sayle
Biomolecular Structures Group, Glaxo Wellcome Research & Development
Stevenage, Hertfordshire, UK
Version 2.6, August 1995, Version 2.6.4, December 1998
Copyright © Roger Sayle 1992-1999

and Based on Mods by
AuthorVersion, DateCopyright
Arne MuellerRasMol 2.6x1 May 1998© Arne Mueller 1998
Gary Grossman and
Marco Molinaro
RasMol 2.5-ucb November 1995
RasMol 2.6-ucb November 1996
© UC Regents/ModularCHEM
Consortium 1995, 1996
Philippe ValadonRasTop 1.3 August 2000© Philippe Valadon 2000
Herbert J. BernsteinRasMol 2.7.0 March 1999
RasMol 2.7.1 June 1999
RasMol 2.7.1.1 January 2001
RasMol 2.7.2 August 2000
RasMol 2.7.2.1 April 2001
© Herbert J. Bernstein 1998-2001

and Incorporating Translations by
AuthorItemLanguage
Isabel Serván Martínez,
José Miguel Fernández Fernández
2.6 ManualSpanish
José Miguel Fernández Fernández2.7.1 ManualSpanish
Fernando Gabriel Ranea2.7.1 menus and messagesSpanish
Jean-Pierre Demailly2.7.1 menus and messagesFrench
Giuseppe Martini, Giovanni Paolella,
A. Davassi, M. Masullo, C. Liotto
2.7.1 menus and messages
2.7.1 help file
Italian

This Release by
Herbert J. Bernstein, Bernstein + Sons, P.O. Box 177, Bellport, NY, USA
yaya@bernstein-plus-sons.com
Copyright © Herbert J. Bernstein 1998-2001

The original RasMol manual was created by Roger Sayle. In July 1996, Dr. Margaret Wong of the Chemistry Department, Swinburne University of Technology, Australia, made extensive revisions to the RasMol 2.5 manual to accurately reflect the operation of RasMol 2.6. Eric Martz of the University of Massachusetts made further revisions. In May 1997, William McClure of Carnegie Mellon University reorganized the HTML version of the manual into multiple sections which could be downloaded quickly and added use of frames. Portions of the 2.7.1 version of the RasMol manual were derived with permission from William McClure's version using Roger Sayle's rasmol.doc for version 2.6.4 as the primary source. Changes were made in August 2000 for RasMol version 2.7.2, January 2001 for RasMol version 2.7.1.1 and April 2001 for RasMol version 2.7.2.1.

Documentation Last Updated 14 April 2000
Edited by Herbert J. Bernstein and Frances C. Bernstein

Translations

Thanks to the efforts of José Miguel Fernández Fernández (Departamento de Bioquímica y Biología Molecular. Universidad de Granada. España (jmfernan@ugr.es)) a translation of the Manual for Rasmol version 2.7.1 into Spanish is now available. La traducción española del manual de la versión de la Dra. Wong revisada por Eric Martz fue realizada por Isabel Serván Martínez y José Miguel Fernández Fernández. La actual traducción del Manual de RasMol 2.7.1 ha sido realizada usando como base la anterior de RasMol 2.6 por  José Miguel Fernández Fernández.

Thanks to translations by Fernando Gabriel Ranea in late 2000 and early 2001, RasMol is now capable of rendering most menu items and messages in Spanish. Jean-Pierre Demailly provided French translations of menus and messages in January 2001. Giuseppe Martini and Giovanni Paolella with contributions by A. Davassi, M. Masullo and C. Liotto provided Italian translation of menus and messages in March 2001.


THIS IS A PRELIMINARY RELEASE INVOLVING EXTENSIVE MODIFICATIONS
***** USE WITH CAUTION ******

This is a preliminary release of a version from the RasMol 2.7 series incorporating the "UCB" mods and other major changes. It is being released at this stage to solicit comments and suggestions, and is not intended for production use at this time.


IMPORTANT

This version is based directly on RasMol version 2.7.2, on RasMol 2.7.1.1, on RasTop 1.3, on RasMol version 2.6_CIF.2, on RasMol version 2.6x1, on RasMol version 2.6.4, and RasMol 2.5-ucb and 2.6-ucb. Please read the file NOTICE for important notices which apply to this package. If you are not going to make changes to RasMol, you are not only permitted to freely make copies and distribute them, you are encouraged to do so, provided you do the following:

If you would like to use major pieces of RasMol in some other program, make modifications to RasMol, or in some other way make what a lawyer would call a "derived work", you are not only permitted to do so, you are encouraged to do so. In addition to the things we discussed above, please do the following:

This version of RasMol is not in the public domain, but it is given freely to the community in the hopes of advancing science. If you make changes, please make them in a responsible manner, and please offer us the opportunity to include those changes in future versions of RasMol.


This documentation directory contains the following "gzipped" files:

 README.gzText version of this file
 README.html.gzHTML version of this file for WWW/HTTP
   
 manualUS.rtf.gz8.5x11 RTF copy of User Manual
(bin)manualUS.ps.gz8.5x11 PostScript version of the RasMol User Manual
(bin)manualUS.pdf.gz8.5x11 PDF version of the RasMol User Manual
 manualA4.rtf.gzA4 RTF copy of User Manual
(bin)manualA4.ps.gzA4 PostScript version of the RasMol User Manual
(bin)manualA4.pdf.gz A4 PDF version of the RasMol User Manual
   
 refcardUS.rtf.gz8.5x11 RTF copy of Ref. Card
(bin)refcardUS.ps.gz8.5x11 PostScript version of Quick Reference Card
(bin)refcardUS.pdf.gz8.5x11 PDF version of Quick Reference Card
 refcardA4.rtf.gzA4 RTF copy of Ref. Card
(bin)refcardA4.ps.gzA4 PostScript version of Quick Reference Card
(bin)refcardA4.pdf.gzA4 PDF version of Quick Reference Card
   
 rasmol.0.gzASCII text formatted version of UNIX 'man' page
 rasmol.1.gzNroff macro version of the UNIX `man' page
   
(bin)rasmol.hlpRasMol help file (unix, mac, windows)
   
 rasmol.vms.gzRasMol help file (VMS librarian HELP text)
   
 raswin.rtf.gzRTF source of RasMol WinHelp document
(bin)raswin.hpj.gzParameter file for RasMol WinHelp document
(bin)raswin.hlp.gzRasMol WinHelp file
   
 rasmol.html.gzHTML version of User Manual for WWW/HTTP

Files marked "(bin)" should be transmitted in binary form.

In addition to the files listed above, there is a master rasmol document file, rasmol.doc.gz, a Makefile and a copy of Roger Sayle's document preparation program prepdoc.c which are used in creating new versions of the documentation.

For those who need uncompressed versions and can accept the longer download times, uncompressed versions are available:

 READMEText version of this file
 manualUS.rtf8.5x11 RTF copy of User Manual
(bin)manualUS.ps8.5x11 PostScript version of the RasMol User Manual
(bin)manualUS.pdf8.5x11 PDF version of the RasMol User Manual
 manualA4.rtfA4 RTF copy of User Manual
(bin)manualA4.psA4 PostScript version of the RasMol User Manual
(bin)manualA4.pdf A4 PDF version of the RasMol User Manual
   
 refcardUS.rtf8.5x11 RTF copy of Ref. Card
(bin)refcardUS.ps8.5x11 PostScript version of Quick Reference Card
(bin)refcardUS.pdf8.5x11 PDF version of Quick Reference Card
 refcardA4.rtfA4 RTF copy of Ref. Card
(bin)refcardA4.psA4 PostScript version of Quick Reference Card
(bin)refcardA4.pdfA4 PDF version of Quick Reference Card
   
 rasmol.0ASCII text formatted version of UNIX 'man' page
 rasmol.1Nroff macro version of the UNIX `man' page
   
(bin)rasmol.hlpRasMol help file (unix, mac, windows)
   
 rasmol.vmsRasMol help file (VMS librarian HELP text)
   
 raswin.rtfRTF source of RasMol WinHelp document
(bin)raswin.hpjParameter file for RasMol WinHelp document
(bin)raswin.hlpRasMol WinHelp file
   
 rasmol.htmlHTML version of User Manual for WWW/HTTP


Updated 24 October 2003,
rasmol@bernstein-plus-sons.com